Everybody has their own method of doing this, but there are a few universal truths. Obviously the handle has no built-in provisions for adjusting the length of the lines. You will want to have adjustment capability on the elevator pushrod, either a threaded clevis at the elevator, or a threaded ball link on the bellcrank, or some such thing. The only way to adjust the length of the throttle line is by changing to longer or shorter line clips.
If your airplane will have leadouts, then I recommend making the leadouts match the handle. Then you do your best to make three equal length lines. By the way, I recommend pre-stretching your wire before you make the lines, because they will grow a bit when a load is applied. In spite of your best efforts, you will probably have to fiddle with clip lengths a bit. If you are a hard point stunt handle, custom make your own line clips kind of guy, this will already be familiar to you. If not, then buy an assortment of different size clips from Brodak. To check the throttle line rigging, disconnect the pushrod from the carburetor, then pull back on the trigger on the handle, and verify that the throttle line doesn't go slack. If it does, the throttle line is too long. If you push the trigger forward and the up/down lines go slack, then the throttle line is too short. Ideally, you can move the trigger through the full range of movement, and no line ever goes slack. Once you have this as good as you can get it, then hook the pushrod back up to the engine and adjust as required. It will be likely that the throttle pushrod will have more travel than the engine requires. This is bad because it will limit the movement of the bellcrank. To correct this, you may need to extend the throttle arm or replace it with a longer one.
This process can seem daunting at first, but if approached methodically, each individual step is not difficult. Best of luck with it!