After everyone's great sugestions I coudn't let this rest until I passed on the information I got. I called Tom Morris to order the booklet that Ty suggested. While I had Tom on the phone I ask how he used his fuselage brackets. The answer was so simple that it is one of those things that makes you want to bang your head on the workbench.
Here is the Reader's Digest version. Get the hard board like Allan suggested. Make a pattern from the top view of the plans. Take a piece of 1/8 balsa, plywood or etc. Draw the verticle line down the center of the 1/8 piece and the horizontal lines at the former locations. Use the pattern to cut the 1/8 piece, flipping it over to be sure it is accurate on both sides. Cut the 1/8 piece to make an exact template of the top view of the plans. Attach thw 1/8 template to the melamine/hardboard, centered & squared. Place the fuselage brackets at each side of the 1/8 template at the former locations and screw them to the board. Put the fuselage side pieces inside the brackets, put the engine crutch inside the fuselage side pieces and fit the formers inside for a tight fit. Basically build the fuselage inside the brackets on top of the template.
He went into more detail, but I think you will get the jest of it. He said you can make a perfect fuselage everytime for $15 for the brackets and a few bucks for the lumber.