Hi Tim,
Good question. I don't think you will have any problems with your design as long as you stay within the most common written rules and within the "spirit" of those rules. Here are some links that may help, and a few observations.
1. It looks like there is a national concensus that the "no flap" bonus and the .40 eng. size rule has gone away .... even here in the ULTRA CONSERVATIVE CL environment of the South West. ;-) Before we adopted the national standard of AMA CL engine size in P40 I was protested for using my eclectic motor in P40 and was refused entry in some contests here in the SW. ........ Now it is a little better for E power here in the SW, but still an up hill battle

2.
http://www.kotrc.org/events/kotrcprofilestuntrules.pdf These are the Profile Rules used in most of the West. From everything I have read, these rules are used in most of our country. Out here we often break P40 (now called "Profile") into two events. Placing beginner and Int together and Adv/Expert together. This is a big help and brings out more people. The front width measurements should help you with your design.
3.
http://www.modelaircraft.org/files/events/rulebooks/CLGeneral.pdf page 6 (table on page 5)
These AMA Profile rules are not directly for CLPA but they give us some guidelines for areas of the country that do not publish their local rules. They are from the CL General section of the rules.
4.
http://stunthanger.com/smf/index.php?topic=5823.0 This is a photo of my Electric Brodack P-40 with the electric "stuff" mounted within a small cover. This was an after thought balsa box (painted in a hurry with a soldering brush! Yikes!!! ;-). I could not stand any more stuff being in sight. :-) Air just goes right through to cool the ESC and cables. BTW, even down here no one ever protested my little box so I think you would be OK using something on your plane to cover stuff up. With a military design you could use a drop tank, or bomb, or top secret WWII ray gun, or???
I am working on a classic legal "Trophy Trainer" profile now that will be E powered. I plan on making a large simulated profile fuel tank (balsa, with chrome film covering) and enclosing the E stuff inside. I will place the battery on the port side of the plane. We will see how that works out.
I'm sure a call to any local CL club officer will be able to get you in contact with a local CL CD and he can fill you in on any local "CL Profile" rules that are not covered above.
Good luck with your P40 P51 design. Please keep us posted with your progress, we need more scale E powered planes in CLPA. :-)
Regards,
