Larry,
I thought the E throttles were using nominally "Futaba"like wire ordering. I think Airtronics was/is different. Basically you have ground (black or brown, +V(red or orange), and signal (white) on the plug. Now the plug itself isn't polarized (it is called "universal" now, which means you can plug it in with 50% chance of being correct!)
With respect to the balancing plug on the battery, there is a lot of controversy about them being non-standard. I have a combo of FMA mainly, the Brodak 4000mAHr battery, two ThunderpowerLite 730mAHr packs with no balancing plug at all, and a 2100mAHr pack from Hobby People I bought for a RC Ducted Fan Foamy--which tends to puff whenever I use it in the Foamy. All have different balancing plugs.
I have two chargers, the first was the Astroflite 109 (non-balancing) which charges through the supply plug (Deans), and on that charger I use an AstroFlight "Blinky" balancer. I have several adapters I use to interface the Blinky with the different packs. Then I bought the FMA cellpro 4s and that charges through the balancing plug. On it I have used only with my FMA packs which of course are the same style. It is another reason to stick with the same manufacturer/packager (of course the reason the manufacturer does it!).