New fuel will clean it too as long as it turns over good, and the rod isn't stuck to the wrist pin let some new fuel soak into it oil it up good and run it, all the gunk will come out the stack , if your fuel is part synthetic it will work even better. If I have the engine disassembled I use straight methanol and a tooth brush. If your head gaskets weren't damaged in disassembly you can re use them. T.J.